High redshift galaxies
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Version 1.0
Catalog provided by Rebecca and Pascal: https://euclid.roe.ac.uk/projects/puswg/wiki/Galaxies
It is a ".txt" file.
I remove the header and copy it into hdfs:
tail -n+2 /cephfs/pic.es/astro/scratch/jcarrete/sandbox/Euclid/High_redshift_galaxies/Euclid_SC8_simcat_LBGs_DPL_16sqdegs_v1.txt | hdfs dfs -copyFromLocal - /user/jcarrete/data/euclid/high_z_galaxies/v1.0/Euclid_SC8_simcat_LBGs_DPL_16sqdegs_v1.csv
I create the external table:
CREATE EXTERNAL TABLE jcarrete.euclid_sc8_simcat_lbgs_dpl_16_sqdegs_v1_0( id bigint COMMENT 'unique galaxy identifier', `type` string COMMENT 'type (LBG for all objects)', z float COMMENT 'Redshift (in the range [6-12])', abs_muv float COMMENT 'absolute magnitude at 1500 angstroms', sedname string COMMENT 'Spectral Energy Distribution name (among 76, 38 without UV lines, 38 with UV lines, corresponding to a given UV slope)', rhalf_kpc float COMMENT 'half light radius (in physical kpc)', rhalf_arcsec float COMMENT 'half light radius (in arcsec)', muv float COMMENT 'for information only, observed magnitude at rest-frame 1500', beta float COMMENT 'for information only, used to assign an SED' ) ROW FORMAT SERDE 'org.apache.hadoop.hive.serde2.lazy.LazySimpleSerDe' WITH SERDEPROPERTIES ( 'field.delim'=' ', 'serialization.format'=' ') STORED AS INPUTFORMAT 'org.apache.hadoop.mapred.TextInputFormat' OUTPUTFORMAT 'org.apache.hadoop.hive.ql.io.HiveIgnoreKeyTextOutputFormat' LOCATION 'hdfs://AntNest/user/jcarrete/data/euclid/high_z_galaxies/v1.0' ;
I create the ORC table:
CREATE TABLE euclid_sc8_simcat_lbgs_dpl_16_sqdegs_v1_0_c( id bigint COMMENT 'unique galaxy identifier', `type` string COMMENT 'type (LBG for all objects)', z float COMMENT 'Redshift (in the range [6-12])', abs_muv float COMMENT 'absolute magnitude at 1500 angstroms', sedname string COMMENT 'Spectral Energy Distribution name (among 76, 38 without UV lines, 38 with UV lines, corresponding to a given UV slope)', rhalf_kpc float COMMENT 'half light radius (in physical kpc)', rhalf_arcsec float COMMENT 'half light radius (in arcsec)', muv float COMMENT 'for information only, observed magnitude at rest-frame 1500', beta float COMMENT 'for information only, used to assign an SED' ) CLUSTERED BY ( id) SORTED BY ( id ASC) INTO 4 BUCKETS ROW FORMAT SERDE 'org.apache.hadoop.hive.ql.io.orc.OrcSerde' STORED AS INPUTFORMAT 'org.apache.hadoop.hive.ql.io.orc.OrcInputFormat' OUTPUTFORMAT 'org.apache.hadoop.hive.ql.io.orc.OrcOutputFormat' ;
Then I covert the data:
INSERT OVERWRITE TABLE cosmohub. euclid_sc8_simcat_lbgs_dpl_16_sqdegs_v1_0_c SELECT * FROM jcarrete.euclid_sc8_simcat_lbgs_dpl_16_sqdegs_v1_0 WHERE id IS NOT NULL;
Version 1.1
I decide to add a new column in order to have the sedname as a integer values rather than as a string value:
CREATE TABLE euclid_sc8_simcat_lbgs_dpl_16_sqdegs_v1_1_c( id bigint COMMENT 'unique galaxy identifier', `type` string COMMENT 'type (LBG for all objects)', z float COMMENT 'Redshift (in the range [6-12])', abs_muv float COMMENT 'absolute magnitude at 1500 angstroms', sedname string COMMENT 'Spectral Energy Distribution name (among 76, 38 without UV lines, 38 with UV lines, corresponding to a given UV slope)', sedname_int int COMMENT 'sedname as integer (from 0 to 75, from 0 to 37 without UV lines, from 38 to 75 with UV lines)', rhalf_kpc float COMMENT 'half light radius (in physical kpc)', rhalf_arcsec float COMMENT 'half light radius (in arcsec)', muv float COMMENT 'for information only, observed magnitude at rest-frame 1500', beta float COMMENT 'for information only, used to assign an SED' ) CLUSTERED BY ( id) SORTED BY ( id ASC) INTO 4 BUCKETS ROW FORMAT SERDE 'org.apache.hadoop.hive.ql.io.orc.OrcSerde' STORED AS INPUTFORMAT 'org.apache.hadoop.hive.ql.io.orc.OrcInputFormat' OUTPUTFORMAT 'org.apache.hadoop.hive.ql.io.orc.OrcOutputFormat' ;
This is the command to convert sedname into sedname_int:
INSERT OVERWRITE TABLE cosmohub.euclid_sc8_simcat_lbgs_dpl_16_sqdegs_v1_1_c SELECT id, `type`,z, abs_muv, sedname, CASE WHEN sedname = 'beta_1.25.dat' THEN 0 WHEN sedname = 'beta_1.30.dat' THEN 1 WHEN sedname = 'beta_1.35.dat' THEN 2 WHEN sedname = 'beta_1.40.dat' THEN 3 WHEN sedname = 'beta_1.45.dat' THEN 4 WHEN sedname = 'beta_1.50.dat' THEN 5 WHEN sedname = 'beta_1.55.dat' THEN 6 WHEN sedname = 'beta_1.60.dat' THEN 7 WHEN sedname = 'beta_1.65.dat' THEN 8 WHEN sedname = 'beta_1.70.dat' THEN 9 WHEN sedname = 'beta_1.75.dat' THEN 10 WHEN sedname = 'beta_1.80.dat' THEN 11 WHEN sedname = 'beta_1.85.dat' THEN 12 WHEN sedname = 'beta_1.90.dat' THEN 13 WHEN sedname = 'beta_1.95.dat' THEN 14 WHEN sedname = 'beta_2.00.dat' THEN 15 WHEN sedname = 'beta_2.05.dat' THEN 16 WHEN sedname = 'beta_2.10.dat' THEN 17 WHEN sedname = 'beta_2.15.dat' THEN 18 WHEN sedname = 'beta_2.20.dat' THEN 19 WHEN sedname = 'beta_2.25.dat' THEN 20 WHEN sedname = 'beta_2.30.dat' THEN 21 WHEN sedname = 'beta_2.35.dat' THEN 22 WHEN sedname = 'beta_2.40.dat' THEN 23 WHEN sedname = 'beta_2.45.dat' THEN 24 WHEN sedname = 'beta_2.50.dat' THEN 25 WHEN sedname = 'beta_2.55.dat' THEN 26 WHEN sedname = 'beta_2.60.dat' THEN 27 WHEN sedname = 'beta_2.65.dat' THEN 28 WHEN sedname = 'beta_2.70.dat' THEN 29 WHEN sedname = 'beta_2.75.dat' THEN 30 WHEN sedname = 'beta_2.80.dat' THEN 31 WHEN sedname = 'beta_2.85.dat' THEN 32 WHEN sedname = 'beta_2.90.dat' THEN 33 WHEN sedname = 'beta_2.95.dat' THEN 34 WHEN sedname = 'beta_3.00.dat' THEN 35 WHEN sedname = 'beta_3.05.dat' THEN 36 WHEN sedname = 'beta_3.10.dat' THEN 37 WHEN sedname = 'beta_1.25_wUVLines.dat' THEN 38 WHEN sedname = 'beta_1.30_wUVLines.dat' THEN 39 WHEN sedname = 'beta_1.35_wUVLines.dat' THEN 40 WHEN sedname = 'beta_1.40_wUVLines.dat' THEN 41 WHEN sedname = 'beta_1.45_wUVLines.dat' THEN 42 WHEN sedname = 'beta_1.50_wUVLines.dat' THEN 43 WHEN sedname = 'beta_1.55_wUVLines.dat' THEN 44 WHEN sedname = 'beta_1.60_wUVLines.dat' THEN 45 WHEN sedname = 'beta_1.65_wUVLines.dat' THEN 46 WHEN sedname = 'beta_1.70_wUVLines.dat' THEN 47 WHEN sedname = 'beta_1.75_wUVLines.dat' THEN 48 WHEN sedname = 'beta_1.80_wUVLines.dat' THEN 49 WHEN sedname = 'beta_1.85_wUVLines.dat' THEN 50 WHEN sedname = 'beta_1.90_wUVLines.dat' THEN 51 WHEN sedname = 'beta_1.95_wUVLines.dat' THEN 52 WHEN sedname = 'beta_2.00_wUVLines.dat' THEN 53 WHEN sedname = 'beta_2.05_wUVLines.dat' THEN 54 WHEN sedname = 'beta_2.10_wUVLines.dat' THEN 55 WHEN sedname = 'beta_2.15_wUVLines.dat' THEN 56 WHEN sedname = 'beta_2.20_wUVLines.dat' THEN 57 WHEN sedname = 'beta_2.25_wUVLines.dat' THEN 58 WHEN sedname = 'beta_2.30_wUVLines.dat' THEN 59 WHEN sedname = 'beta_2.35_wUVLines.dat' THEN 60 WHEN sedname = 'beta_2.40_wUVLines.dat' THEN 61 WHEN sedname = 'beta_2.45_wUVLines.dat' THEN 62 WHEN sedname = 'beta_2.50_wUVLines.dat' THEN 63 WHEN sedname = 'beta_2.55_wUVLines.dat' THEN 64 WHEN sedname = 'beta_2.60_wUVLines.dat' THEN 65 WHEN sedname = 'beta_2.65_wUVLines.dat' THEN 66 WHEN sedname = 'beta_2.70_wUVLines.dat' THEN 67 WHEN sedname = 'beta_2.75_wUVLines.dat' THEN 68 WHEN sedname = 'beta_2.80_wUVLines.dat' THEN 69 WHEN sedname = 'beta_2.85_wUVLines.dat' THEN 70 WHEN sedname = 'beta_2.90_wUVLines.dat' THEN 71 WHEN sedname = 'beta_2.95_wUVLines.dat' THEN 72 WHEN sedname = 'beta_3.00_wUVLines.dat' THEN 73 WHEN sedname = 'beta_3.05_wUVLines.dat' THEN 74 WHEN sedname = 'beta_3.10_wUVLines.dat' THEN 75 END as sedname_int, rhalf_kpc, rhalf_arcsec, muv, beta FROM jcarrete.euclid_sc8_simcat_lbgs_dpl_16_sqdegs_v1_0 WHERE id IS NOT NULL;
ANALYZE TABLE cosmohub.euclid_sc8_simcat_lbgs_dpl_16_sqdegs_v1_1_c COMPUTE STATISTICS FOR COLUMNS;
Then I create the catalog in CosmoHub.